Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.74■■□□□ 1.07
RARAP10276 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 AC073314.1-201ENST00000568729 2216 ntBASIC21.74■■□□□ 1.07
RARAP10276 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.74■■□□□ 1.07
RARAP10276 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.74■■□□□ 1.07
RARAP10276 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RARAP10276 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.74■■□□□ 1.07
RARAP10276 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 KRT18P14-201ENST00000534205 1250 ntBASIC21.74■■□□□ 1.07
RARAP10276 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.74■■□□□ 1.07
RARAP10276 AC138907.5-202ENST00000569484 235 ntBASIC21.74■■□□□ 1.07
RARAP10276 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RARAP10276 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RARAP10276 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.73■■□□□ 1.07
RARAP10276 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.73■■□□□ 1.07
RARAP10276 AP005212.1-201ENST00000581547 1997 ntBASIC21.73■■□□□ 1.07
RARAP10276 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RARAP10276 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.73■■□□□ 1.07
RARAP10276 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RARAP10276 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 AP004607.4-201ENST00000530158 1459 ntBASIC21.72■■□□□ 1.07
RARAP10276 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.72■■□□□ 1.07
RARAP10276 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RARAP10276 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.72■■□□□ 1.07
RARAP10276 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RARAP10276 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 GABARAPL3-202ENST00000624044 1851 ntBASIC21.71■■□□□ 1.07
RARAP10276 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.71■■□□□ 1.07
RARAP10276 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.71■■□□□ 1.07
RARAP10276 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 AC104187.1-201ENST00000607510 612 ntBASIC21.71■■□□□ 1.07
RARAP10276 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.71■■□□□ 1.07
RARAP10276 AC008175.2-201ENST00000612840 297 ntBASIC21.71■■□□□ 1.07
RARAP10276 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
RARAP10276 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 AC121338.2-201ENST00000622535 1744 ntBASIC21.71■■□□□ 1.07
RARAP10276 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RARAP10276 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RARAP10276 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
RARAP10276 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
RARAP10276 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 POU5F1P4-201ENST00000413175 1085 ntBASIC21.7■■□□□ 1.06
RARAP10276 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.7■■□□□ 1.06
RARAP10276 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.7■■□□□ 1.06
RARAP10276 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.7■■□□□ 1.06
RARAP10276 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.7■■□□□ 1.06
RARAP10276 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.7■■□□□ 1.06
RARAP10276 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RARAP10276 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RARAP10276 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RARAP10276 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RARAP10276 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARAP10276 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.69■■□□□ 1.06
RARAP10276 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms