Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CSF1P09603 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.87■□□□□ 0.45
CSF1P09603 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CSF1P09603 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.87■□□□□ 0.45
CSF1P09603 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSF1P09603 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.86■□□□□ 0.45
CSF1P09603 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.86■□□□□ 0.45
CSF1P09603 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.86■□□□□ 0.45
CSF1P09603 AF213884.3-201ENST00000563833 479 ntBASIC17.86■□□□□ 0.45
CSF1P09603 AL034346.1-201ENST00000568244 1277 ntBASIC17.86■□□□□ 0.45
CSF1P09603 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CSF1P09603 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.86■□□□□ 0.45
CSF1P09603 PLK5-205ENST00000642079 1969 ntBASIC17.86■□□□□ 0.45
CSF1P09603 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.86■□□□□ 0.45
CSF1P09603 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSF1P09603 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CSF1P09603 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSF1P09603 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.85■□□□□ 0.45
CSF1P09603 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.85■□□□□ 0.45
CSF1P09603 PCDHAC2-203ENST00000615316 3011 ntBASIC17.85■□□□□ 0.45
CSF1P09603 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.85■□□□□ 0.45
CSF1P09603 AC068587.7-201ENST00000641602 218 ntBASIC17.85■□□□□ 0.45
CSF1P09603 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.85■□□□□ 0.45
CSF1P09603 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
CSF1P09603 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSF1P09603 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 SYT6-210ENST00000641643 1587 ntBASIC17.84■□□□□ 0.45
CSF1P09603 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.84■□□□□ 0.45
CSF1P09603 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CSF1P09603 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.84■□□□□ 0.45
CSF1P09603 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.84■□□□□ 0.45
CSF1P09603 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSF1P09603 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.84■□□□□ 0.45
CSF1P09603 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSF1P09603 AC020907.5-201ENST00000624372 1936 ntBASIC17.84■□□□□ 0.45
CSF1P09603 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSF1P09603 AC027702.1-201ENST00000563810 1770 ntBASIC17.84■□□□□ 0.45
CSF1P09603 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
CSF1P09603 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSF1P09603 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSF1P09603 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.83■□□□□ 0.45
CSF1P09603 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSF1P09603 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSF1P09603 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CSF1P09603 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CSF1P09603 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSF1P09603 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CSF1P09603 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSF1P09603 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.83■□□□□ 0.44
CSF1P09603 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.83■□□□□ 0.44
CSF1P09603 AL136967.2-201ENST00000623968 743 ntBASIC17.83■□□□□ 0.44
CSF1P09603 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms