Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRPRAP08240 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRPRAP08240 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21■□□□□ 0.95
SRPRAP08240 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRPRAP08240 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRPRAP08240 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRPRAP08240 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.99■□□□□ 0.95
SRPRAP08240 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SRPRAP08240 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SRPRAP08240 AL355472.2-201ENST00000422958 438 ntBASIC20.99■□□□□ 0.95
SRPRAP08240 DUSP5P2-201ENST00000426873 1033 ntBASIC20.99■□□□□ 0.95
SRPRAP08240 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRPRAP08240 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SRPRAP08240 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.99■□□□□ 0.95
SRPRAP08240 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.99■□□□□ 0.95
SRPRAP08240 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SRPRAP08240 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
SRPRAP08240 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.99■□□□□ 0.95
SRPRAP08240 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRPRAP08240 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.99■□□□□ 0.95
SRPRAP08240 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SRPRAP08240 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SRPRAP08240 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
SRPRAP08240 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SRPRAP08240 ABHD17AP1-201ENST00000358206 933 ntBASIC20.98■□□□□ 0.95
SRPRAP08240 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.98■□□□□ 0.95
SRPRAP08240 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.98■□□□□ 0.95
SRPRAP08240 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.98■□□□□ 0.95
SRPRAP08240 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.98■□□□□ 0.95
SRPRAP08240 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRPRAP08240 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.97■□□□□ 0.95
SRPRAP08240 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.97■□□□□ 0.95
SRPRAP08240 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.97■□□□□ 0.95
SRPRAP08240 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SRPRAP08240 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.97■□□□□ 0.95
SRPRAP08240 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.97■□□□□ 0.95
SRPRAP08240 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRPRAP08240 AC083880.1-201ENST00000608266 535 ntBASIC20.97■□□□□ 0.95
SRPRAP08240 AL589743.5-201ENST00000616611 1050 ntBASIC20.97■□□□□ 0.95
SRPRAP08240 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.97■□□□□ 0.95
SRPRAP08240 KRT17P1-201ENST00000399211 1546 ntBASIC20.97■□□□□ 0.95
SRPRAP08240 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.97■□□□□ 0.95
SRPRAP08240 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SRPRAP08240 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.96■□□□□ 0.95
SRPRAP08240 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
SRPRAP08240 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.96■□□□□ 0.95
SRPRAP08240 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRPRAP08240 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.96■□□□□ 0.95
SRPRAP08240 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SRPRAP08240 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPRAP08240 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRPRAP08240 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPRAP08240 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRPRAP08240 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
SRPRAP08240 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRPRAP08240 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.95■□□□□ 0.94
SRPRAP08240 KRT18P68-201ENST00000392293 1000 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms