Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 AC131281.2-201ENST00000520478 145 ntBASIC18.75■□□□□ 0.59
HMGN1P05114 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 AC126544.1-201ENST00000580842 1059 ntBASIC18.75■□□□□ 0.59
HMGN1P05114 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGN1P05114 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HMGN1P05114 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 IGHV3-19-201ENST00000521488 291 ntBASIC18.74■□□□□ 0.59
HMGN1P05114 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGN1P05114 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGN1P05114 MIR4767-201ENST00000582827 78 ntBASIC18.74■□□□□ 0.59
HMGN1P05114 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGN1P05114 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGN1P05114 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMGN1P05114 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMGN1P05114 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMGN1P05114 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGN1P05114 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGN1P05114 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGN1P05114 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGN1P05114 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGN1P05114 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGN1P05114 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HMGN1P05114 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGN1P05114 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGN1P05114 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 AC005224.4-201ENST00000583262 1652 ntBASIC18.72■□□□□ 0.59
HMGN1P05114 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HMGN1P05114 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGN1P05114 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGN1P05114 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
HMGN1P05114 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGN1P05114 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGN1P05114 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGN1P05114 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGN1P05114 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGN1P05114 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGN1P05114 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
HMGN1P05114 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HMGN1P05114 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGN1P05114 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms