Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.77■□□□□ 0.11
TCRAP04437 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TCRAP04437 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRAP04437 RNF165-205ENST00000588679 2904 ntBASIC15.76■□□□□ 0.11
TCRAP04437 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.76■□□□□ 0.11
TCRAP04437 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TCRAP04437 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRAP04437 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRAP04437 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TCRAP04437 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRAP04437 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRAP04437 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRAP04437 AL512408.1-201ENST00000569378 2000 ntBASIC15.75■□□□□ 0.11
TCRAP04437 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRAP04437 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TCRAP04437 RARRES2P1-201ENST00000474487 481 ntBASIC15.75■□□□□ 0.11
TCRAP04437 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRAP04437 AL138724.1-201ENST00000606771 1088 ntBASIC15.75■□□□□ 0.11
TCRAP04437 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRAP04437 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 FP700111.2-201ENST00000619190 1892 ntBASIC15.75■□□□□ 0.11
TCRAP04437 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TCRAP04437 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRAP04437 AC112907.3-201ENST00000577781 2400 ntBASIC15.75■□□□□ 0.11
TCRAP04437 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRAP04437 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 MIR3621-201ENST00000580529 85 ntBASIC15.74■□□□□ 0.11
TCRAP04437 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRAP04437 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRAP04437 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.74■□□□□ 0.11
TCRAP04437 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRAP04437 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TCRAP04437 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRAP04437 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRAP04437 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRAP04437 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRAP04437 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRAP04437 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TCRAP04437 SLC47A1P1-202ENST00000449666 945 ntBASIC15.73■□□□□ 0.11
TCRAP04437 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.73■□□□□ 0.11
TCRAP04437 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.73■□□□□ 0.11
TCRAP04437 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRAP04437 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRAP04437 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRAP04437 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TCRAP04437 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRAP04437 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRAP04437 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TCRAP04437 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRAP04437 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms