Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.05■□□□□ 0.96
MT-ND3P03897 PLK5-205ENST00000642079 1969 ntBASIC21.05■□□□□ 0.96
MT-ND3P03897 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 AP006587.3-201ENST00000525742 1516 ntBASIC21.04■□□□□ 0.96
MT-ND3P03897 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.04■□□□□ 0.96
MT-ND3P03897 AC123595.1-201ENST00000440769 1046 ntBASIC21.04■□□□□ 0.96
MT-ND3P03897 AP005435.1-201ENST00000529293 1178 ntBASIC21.04■□□□□ 0.96
MT-ND3P03897 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
MT-ND3P03897 AP005212.1-201ENST00000581547 1997 ntBASIC21.04■□□□□ 0.96
MT-ND3P03897 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MT-ND3P03897 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND3P03897 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MT-ND3P03897 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MT-ND3P03897 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
MT-ND3P03897 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.03■□□□□ 0.96
MT-ND3P03897 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MT-ND3P03897 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.03■□□□□ 0.96
MT-ND3P03897 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
MT-ND3P03897 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 AC012414.1-201ENST00000556676 535 ntBASIC21.03■□□□□ 0.96
MT-ND3P03897 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.03■□□□□ 0.96
MT-ND3P03897 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND3P03897 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-ND3P03897 AC073314.1-201ENST00000568729 2216 ntBASIC21.02■□□□□ 0.96
MT-ND3P03897 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND3P03897 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.02■□□□□ 0.96
MT-ND3P03897 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
MT-ND3P03897 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND3P03897 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.02■□□□□ 0.96
MT-ND3P03897 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND3P03897 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.02■□□□□ 0.96
MT-ND3P03897 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
MT-ND3P03897 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND3P03897 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-ND3P03897 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-ND3P03897 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.02■□□□□ 0.95
MT-ND3P03897 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND3P03897 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND3P03897 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.02■□□□□ 0.95
MT-ND3P03897 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND3P03897 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND3P03897 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.02■□□□□ 0.95
MT-ND3P03897 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.95
MT-ND3P03897 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.01■□□□□ 0.95
MT-ND3P03897 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.01■□□□□ 0.95
MT-ND3P03897 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MT-ND3P03897 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.01■□□□□ 0.95
MT-ND3P03897 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
MT-ND3P03897 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND3P03897 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21■□□□□ 0.95
MT-ND3P03897 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21■□□□□ 0.95
MT-ND3P03897 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21■□□□□ 0.95
MT-ND3P03897 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21■□□□□ 0.95
MT-ND3P03897 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MT-ND3P03897 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND3P03897 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MT-ND3P03897 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.99■□□□□ 0.95
MT-ND3P03897 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MT-ND3P03897 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MT-ND3P03897 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.99■□□□□ 0.95
MT-ND3P03897 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.99■□□□□ 0.95
MT-ND3P03897 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms