Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF254O75437 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF254O75437 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.34■□□□□ 0.53
ZNF254O75437 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ZNF254O75437 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF254O75437 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF254O75437 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF254O75437 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF254O75437 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF254O75437 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF254O75437 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZNF254O75437 AC121338.2-201ENST00000622535 1744 ntBASIC18.33■□□□□ 0.52
ZNF254O75437 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF254O75437 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF254O75437 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF254O75437 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 AC096631.2-201ENST00000436136 790 ntBASIC18.33■□□□□ 0.52
ZNF254O75437 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.33■□□□□ 0.52
ZNF254O75437 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.33■□□□□ 0.52
ZNF254O75437 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF254O75437 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF254O75437 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF254O75437 RASA4CP-201ENST00000424092 1398 ntBASIC18.32■□□□□ 0.52
ZNF254O75437 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 PLK5-205ENST00000642079 1969 ntBASIC18.32■□□□□ 0.52
ZNF254O75437 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF254O75437 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF254O75437 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF254O75437 AL355001.2-201ENST00000620617 1191 ntBASIC18.32■□□□□ 0.52
ZNF254O75437 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ZNF254O75437 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF254O75437 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF254O75437 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF254O75437 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF254O75437 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF254O75437 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF254O75437 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.31■□□□□ 0.52
ZNF254O75437 AP001330.3-201ENST00000520123 633 ntBASIC18.31■□□□□ 0.52
ZNF254O75437 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF254O75437 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZNF254O75437 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF254O75437 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF254O75437 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF254O75437 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ZNF254O75437 AC073314.1-201ENST00000568729 2216 ntBASIC18.3■□□□□ 0.52
ZNF254O75437 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF254O75437 AC053503.5-201ENST00000601508 636 ntBASIC18.3■□□□□ 0.52
ZNF254O75437 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF254O75437 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF254O75437 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF254O75437 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
ZNF254O75437 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF254O75437 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF254O75437 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF254O75437 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZNF254O75437 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF254O75437 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.29■□□□□ 0.52
ZNF254O75437 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF254O75437 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms