Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF11O60813 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF11O60813 CLDN5-201ENST00000403084 2357 ntBASIC21.09■□□□□ 0.97
PRAMEF11O60813 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF11O60813 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF11O60813 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF11O60813 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF11O60813 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF11O60813 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF11O60813 AC116050.2-201ENST00000612102 1779 ntBASIC21.09■□□□□ 0.97
PRAMEF11O60813 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF11O60813 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 AC005181.1-201ENST00000604782 1256 ntBASIC21.08■□□□□ 0.97
PRAMEF11O60813 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF11O60813 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.07■□□□□ 0.96
PRAMEF11O60813 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 AC007322.3-201ENST00000426526 701 ntBASIC21.07■□□□□ 0.96
PRAMEF11O60813 CROCCP5-201ENST00000436658 830 ntBASIC21.07■□□□□ 0.96
PRAMEF11O60813 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 CDV3P1-201ENST00000471403 739 ntBASIC21.07■□□□□ 0.96
PRAMEF11O60813 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF11O60813 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF11O60813 AL137060.1-201ENST00000618151 2648 ntBASIC21.07■□□□□ 0.96
PRAMEF11O60813 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 AC011484.1-201ENST00000377652 1995 ntBASIC21.06■□□□□ 0.96
PRAMEF11O60813 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 CYP2T1P-201ENST00000432607 1285 ntBASIC21.06■□□□□ 0.96
PRAMEF11O60813 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 AC016405.3-201ENST00000607710 860 ntBASIC21.06■□□□□ 0.96
PRAMEF11O60813 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF11O60813 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PRAMEF11O60813 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 AC121338.2-201ENST00000622535 1744 ntBASIC21.05■□□□□ 0.96
PRAMEF11O60813 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 MIR663A-201ENST00000385250 93 ntBASIC21.05■□□□□ 0.96
PRAMEF11O60813 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 FAM21FP-204ENST00000608637 956 ntBASIC21.05■□□□□ 0.96
PRAMEF11O60813 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PRAMEF11O60813 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF11O60813 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms