Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTIPO60759 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYTIPO60759 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.52■□□□□ 0.55
CYTIPO60759 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CYTIPO60759 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CYTIPO60759 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.51■□□□□ 0.55
CYTIPO60759 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.51■□□□□ 0.55
CYTIPO60759 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CYTIPO60759 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.51■□□□□ 0.55
CYTIPO60759 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.51■□□□□ 0.55
CYTIPO60759 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.51■□□□□ 0.55
CYTIPO60759 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYTIPO60759 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.5■□□□□ 0.55
CYTIPO60759 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CYTIPO60759 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.5■□□□□ 0.55
CYTIPO60759 AL162412.1-201ENST00000567129 965 ntBASIC18.5■□□□□ 0.55
CYTIPO60759 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 AL591742.1-201ENST00000604433 565 ntBASIC18.5■□□□□ 0.55
CYTIPO60759 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CYTIPO60759 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CYTIPO60759 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.5■□□□□ 0.55
CYTIPO60759 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYTIPO60759 AC068338.2-201ENST00000563278 1430 ntBASIC18.49■□□□□ 0.55
CYTIPO60759 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CYTIPO60759 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.49■□□□□ 0.55
CYTIPO60759 AC005181.1-201ENST00000604782 1256 ntBASIC18.49■□□□□ 0.55
CYTIPO60759 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.49■□□□□ 0.55
CYTIPO60759 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CYTIPO60759 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.49■□□□□ 0.55
CYTIPO60759 FEM1AP4-201ENST00000443167 1987 ntBASIC18.49■□□□□ 0.55
CYTIPO60759 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CYTIPO60759 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CYTIPO60759 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYTIPO60759 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
CYTIPO60759 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
CYTIPO60759 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CYTIPO60759 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CYTIPO60759 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.48■□□□□ 0.55
CYTIPO60759 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.48■□□□□ 0.55
CYTIPO60759 CROCCP5-201ENST00000436658 830 ntBASIC18.48■□□□□ 0.55
CYTIPO60759 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.48■□□□□ 0.55
CYTIPO60759 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.48■□□□□ 0.55
CYTIPO60759 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYTIPO60759 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
CYTIPO60759 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
CYTIPO60759 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.47■□□□□ 0.55
CYTIPO60759 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYTIPO60759 AC026310.3-201ENST00000625186 2373 ntBASIC18.47■□□□□ 0.55
CYTIPO60759 MIR663A-201ENST00000385250 93 ntBASIC18.47■□□□□ 0.55
CYTIPO60759 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.47■□□□□ 0.55
CYTIPO60759 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYTIPO60759 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CYTIPO60759 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYTIPO60759 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CYTIPO60759 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.47■□□□□ 0.55
CYTIPO60759 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYTIPO60759 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms