Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IDH3BO43837 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IDH3BO43837 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IDH3BO43837 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IDH3BO43837 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.93■□□□□ 0.62
IDH3BO43837 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.93■□□□□ 0.62
IDH3BO43837 IGHV3-19-201ENST00000521488 291 ntBASIC18.93■□□□□ 0.62
IDH3BO43837 AC126544.1-201ENST00000580842 1059 ntBASIC18.93■□□□□ 0.62
IDH3BO43837 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
IDH3BO43837 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
IDH3BO43837 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.93■□□□□ 0.62
IDH3BO43837 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.93■□□□□ 0.62
IDH3BO43837 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IDH3BO43837 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.92■□□□□ 0.62
IDH3BO43837 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IDH3BO43837 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
IDH3BO43837 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
IDH3BO43837 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.92■□□□□ 0.62
IDH3BO43837 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
IDH3BO43837 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IDH3BO43837 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
IDH3BO43837 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.91■□□□□ 0.62
IDH3BO43837 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.91■□□□□ 0.62
IDH3BO43837 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.91■□□□□ 0.62
IDH3BO43837 AL136162.1-201ENST00000607711 1078 ntBASIC18.91■□□□□ 0.62
IDH3BO43837 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IDH3BO43837 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
IDH3BO43837 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.91■□□□□ 0.62
IDH3BO43837 AC087289.5-201ENST00000586076 3175 ntBASIC18.91■□□□□ 0.62
IDH3BO43837 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IDH3BO43837 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.9■□□□□ 0.62
IDH3BO43837 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.9■□□□□ 0.62
IDH3BO43837 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.9■□□□□ 0.62
IDH3BO43837 AC024257.2-201ENST00000549699 147 ntBASIC18.9■□□□□ 0.62
IDH3BO43837 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.9■□□□□ 0.62
IDH3BO43837 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
IDH3BO43837 AC135279.3-201ENST00000610945 1311 ntBASIC18.9■□□□□ 0.62
IDH3BO43837 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IDH3BO43837 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.9■□□□□ 0.62
IDH3BO43837 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IDH3BO43837 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms