Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.71■□□□□ 0.91
PFDN6O15212 KRT18P20-201ENST00000548986 1279 ntBASIC20.71■□□□□ 0.91
PFDN6O15212 AC104187.1-201ENST00000607510 612 ntBASIC20.71■□□□□ 0.91
PFDN6O15212 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PFDN6O15212 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN6O15212 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PFDN6O15212 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.7■□□□□ 0.9
PFDN6O15212 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.7■□□□□ 0.9
PFDN6O15212 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PFDN6O15212 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.7■□□□□ 0.9
PFDN6O15212 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.7■□□□□ 0.9
PFDN6O15212 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.7■□□□□ 0.9
PFDN6O15212 AC245052.3-201ENST00000450182 901 ntBASIC20.7■□□□□ 0.9
PFDN6O15212 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.7■□□□□ 0.9
PFDN6O15212 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
PFDN6O15212 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN6O15212 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN6O15212 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN6O15212 KRT19P1-201ENST00000405746 1186 ntBASIC20.69■□□□□ 0.9
PFDN6O15212 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.69■□□□□ 0.9
PFDN6O15212 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.69■□□□□ 0.9
PFDN6O15212 AP001160.3-201ENST00000601484 763 ntBASIC20.69■□□□□ 0.9
PFDN6O15212 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN6O15212 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN6O15212 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
PFDN6O15212 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN6O15212 AC121338.2-201ENST00000622535 1744 ntBASIC20.68■□□□□ 0.9
PFDN6O15212 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PFDN6O15212 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.68■□□□□ 0.9
PFDN6O15212 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PFDN6O15212 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.68■□□□□ 0.9
PFDN6O15212 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
PFDN6O15212 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PFDN6O15212 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
PFDN6O15212 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN6O15212 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PFDN6O15212 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.67■□□□□ 0.9
PFDN6O15212 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PFDN6O15212 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PFDN6O15212 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN6O15212 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.67■□□□□ 0.9
PFDN6O15212 RNF165-205ENST00000588679 2904 ntBASIC20.67■□□□□ 0.9
PFDN6O15212 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PFDN6O15212 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.67■□□□□ 0.9
PFDN6O15212 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PFDN6O15212 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.66■□□□□ 0.9
PFDN6O15212 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
PFDN6O15212 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.66■□□□□ 0.9
PFDN6O15212 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.66■□□□□ 0.9
PFDN6O15212 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.66■□□□□ 0.9
PFDN6O15212 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.66■□□□□ 0.9
PFDN6O15212 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.66■□□□□ 0.9
PFDN6O15212 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
PFDN6O15212 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.66■□□□□ 0.9
PFDN6O15212 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN6O15212 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms