Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC34.15■■■■□ 3.06
CHD1O14646 GGT1-206ENST00000404223 952 ntTSL 2 BASIC34.15■■■■□ 3.06
CHD1O14646 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC34.15■■■■□ 3.06
CHD1O14646 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC34.15■■■■□ 3.06
CHD1O14646 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC34.15■■■■□ 3.06
CHD1O14646 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD1O14646 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC34.14■■■■□ 3.06
CHD1O14646 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC34.14■■■■□ 3.06
CHD1O14646 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD1O14646 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD1O14646 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC34.14■■■■□ 3.06
CHD1O14646 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD1O14646 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
CHD1O14646 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC34.13■■■■□ 3.05
CHD1O14646 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CHD1O14646 NXN-202ENST00000537628 1340 ntTSL 3 BASIC34.13■■■■□ 3.05
CHD1O14646 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CHD1O14646 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
CHD1O14646 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CHD1O14646 DUX4L26-201ENST00000489078 1255 ntBASIC34.12■■■■□ 3.05
CHD1O14646 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC34.12■■■■□ 3.05
CHD1O14646 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CHD1O14646 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 AC092068.2-201ENST00000590491 1708 ntBASIC34.11■■■■□ 3.05
CHD1O14646 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC34.11■■■■□ 3.05
CHD1O14646 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC34.11■■■■□ 3.05
CHD1O14646 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC34.11■■■■□ 3.05
CHD1O14646 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
CHD1O14646 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1O14646 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1O14646 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1O14646 PTPA-214ENST00000423100 988 ntTSL 2 BASIC34.1■■■■□ 3.05
CHD1O14646 RBM17P1-201ENST00000453646 1190 ntBASIC34.1■■■■□ 3.05
CHD1O14646 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1O14646 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC34.1■■■■□ 3.05
CHD1O14646 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC34.1■■■■□ 3.05
CHD1O14646 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC34.1■■■■□ 3.05
CHD1O14646 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1O14646 METTL23-204ENST00000586752 904 ntTSL 2 BASIC34.1■■■■□ 3.05
CHD1O14646 Six3os1_6.1-201ENST00000620790 196 ntBASIC34.1■■■■□ 3.05
CHD1O14646 AC079598.2-202ENST00000546624 1451 ntBASIC34.09■■■■□ 3.05
CHD1O14646 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
CHD1O14646 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
CHD1O14646 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC34.09■■■■□ 3.05
CHD1O14646 SERP1-205ENST00000487153 657 ntTSL 4 BASIC34.09■■■■□ 3.05
CHD1O14646 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC34.09■■■■□ 3.05
CHD1O14646 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC34.09■■■■□ 3.05
CHD1O14646 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC34.09■■■■□ 3.05
CHD1O14646 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC34.09■■■■□ 3.05
CHD1O14646 AC073508.3-201ENST00000619697 1419 ntBASIC34.08■■■■□ 3.05
CHD1O14646 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CHD1O14646 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CHD1O14646 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC34.08■■■■□ 3.05
CHD1O14646 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CHD1O14646 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CHD1O14646 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CHD1O14646 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CHD1O14646 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.05
CHD1O14646 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC34.07■■■■□ 3.05
CHD1O14646 AC005363.2-201ENST00000618631 242 ntBASIC34.07■■■■□ 3.05
CHD1O14646 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC34.07■■■■□ 3.05
CHD1O14646 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CHD1O14646 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC34.07■■■■□ 3.04
CHD1O14646 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC34.07■■■■□ 3.04
CHD1O14646 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CHD1O14646 AC120498.8-201ENST00000614275 531 ntBASIC34.07■■■■□ 3.04
CHD1O14646 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CHD1O14646 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CHD1O14646 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC34.06■■■■□ 3.04
CHD1O14646 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC34.06■■■■□ 3.04
CHD1O14646 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC34.06■■■■□ 3.04
CHD1O14646 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC34.06■■■■□ 3.04
CHD1O14646 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CHD1O14646 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CHD1O14646 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC34.06■■■■□ 3.04
CHD1O14646 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CHD1O14646 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC34.06■■■■□ 3.04
CHD1O14646 LINC01124-201ENST00000409786 2117 ntBASIC34.05■■■■□ 3.04
CHD1O14646 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC34.05■■■■□ 3.04
CHD1O14646 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC34.05■■■■□ 3.04
CHD1O14646 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
CHD1O14646 SLC25A3P1-201ENST00000443844 931 ntBASIC34.05■■■■□ 3.04
CHD1O14646 REXO1L10P-201ENST00000615707 1290 ntBASIC34.05■■■■□ 3.04
CHD1O14646 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC34.05■■■■□ 3.04
CHD1O14646 DECR2-212ENST00000627716 352 ntTSL 2 BASIC34.05■■■■□ 3.04
CHD1O14646 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC34.05■■■■□ 3.04
CHD1O14646 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC34.05■■■■□ 3.04
CHD1O14646 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
CHD1O14646 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CHD1O14646 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC34.04■■■■□ 3.04
CHD1O14646 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CHD1O14646 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC34.04■■■■□ 3.04
CHD1O14646 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC34.04■■■■□ 3.04
CHD1O14646 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC34.04■■■■□ 3.04
CHD1O14646 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
CHD1O14646 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms