Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM38O00635 AC098934.4-201ENST00000564127 592 ntBASIC20.81■□□□□ 0.92
TRIM38O00635 MIR4651-201ENST00000582622 73 ntBASIC20.81■□□□□ 0.92
TRIM38O00635 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM38O00635 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM38O00635 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM38O00635 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
TRIM38O00635 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM38O00635 EEF1DP3-203ENST00000566025 782 ntBASIC20.8■□□□□ 0.92
TRIM38O00635 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM38O00635 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM38O00635 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.79■□□□□ 0.92
TRIM38O00635 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM38O00635 AC133041.1-202ENST00000642053 222 ntBASIC20.79■□□□□ 0.92
TRIM38O00635 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM38O00635 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM38O00635 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM38O00635 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM38O00635 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.78■□□□□ 0.92
TRIM38O00635 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM38O00635 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 TERF1P5-201ENST00000477545 1207 ntBASIC20.78■□□□□ 0.92
TRIM38O00635 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM38O00635 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM38O00635 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM38O00635 AL034346.1-201ENST00000568244 1277 ntBASIC20.78■□□□□ 0.92
TRIM38O00635 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM38O00635 AC013268.1-206ENST00000638368 961 ntBASIC20.78■□□□□ 0.92
TRIM38O00635 AC112229.1-201ENST00000639295 961 ntBASIC20.78■□□□□ 0.92
TRIM38O00635 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM38O00635 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM38O00635 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM38O00635 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM38O00635 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM38O00635 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM38O00635 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM38O00635 AC073210.2-201ENST00000430369 194 ntBASIC20.77■□□□□ 0.92
TRIM38O00635 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRIM38O00635 SLC7A5P1-201ENST00000568957 537 ntBASIC20.77■□□□□ 0.92
TRIM38O00635 AC053503.5-201ENST00000601508 636 ntBASIC20.77■□□□□ 0.92
TRIM38O00635 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM38O00635 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM38O00635 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM38O00635 AP006587.3-201ENST00000525742 1516 ntBASIC20.77■□□□□ 0.92
TRIM38O00635 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRIM38O00635 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM38O00635 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.77■□□□□ 0.91
TRIM38O00635 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM38O00635 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM38O00635 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM38O00635 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM38O00635 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM38O00635 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM38O00635 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM38O00635 AC066615.1-201ENST00000640911 628 ntBASIC20.76■□□□□ 0.91
TRIM38O00635 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM38O00635 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM38O00635 AC068338.2-201ENST00000563278 1430 ntBASIC20.76■□□□□ 0.91
TRIM38O00635 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms