Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.34■□□□□ 0.85
CDC7O00311 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L6-201ENST00000626483 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L1-201ENST00000627662 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L8-201ENST00000629013 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L3-201ENST00000630187 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L7-201ENST00000630678 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DUX4L5-201ENST00000630834 1275 ntBASIC20.34■□□□□ 0.85
CDC7O00311 RARRES2P11-201ENST00000635158 484 ntBASIC20.34■□□□□ 0.85
CDC7O00311 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.34■□□□□ 0.85
CDC7O00311 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDC7O00311 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDC7O00311 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDC7O00311 AC073130.3-201ENST00000624389 2278 ntBASIC20.34■□□□□ 0.85
CDC7O00311 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CDC7O00311 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 AC092667.1-201ENST00000434301 2586 ntBASIC20.34■□□□□ 0.85
CDC7O00311 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC7O00311 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC7O00311 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CDC7O00311 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC7O00311 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC7O00311 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC7O00311 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.33■□□□□ 0.85
CDC7O00311 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC7O00311 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.33■□□□□ 0.85
CDC7O00311 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.33■□□□□ 0.85
CDC7O00311 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.33■□□□□ 0.85
CDC7O00311 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 KRT16P2-201ENST00000414673 1423 ntBASIC20.33■□□□□ 0.84
CDC7O00311 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CDC7O00311 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC7O00311 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC7O00311 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDC7O00311 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CDC7O00311 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC7O00311 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC7O00311 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC7O00311 LINC01521-201ENST00000504184 1943 ntBASIC20.32■□□□□ 0.84
CDC7O00311 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC7O00311 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC7O00311 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC7O00311 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC7O00311 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC7O00311 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.31■□□□□ 0.84
CDC7O00311 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC7O00311 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC7O00311 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC7O00311 KRT18P61-201ENST00000585825 1298 ntBASIC20.31■□□□□ 0.84
CDC7O00311 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC7O00311 AC073314.1-201ENST00000568729 2216 ntBASIC20.31■□□□□ 0.84
CDC7O00311 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDC7O00311 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC7O00311 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC7O00311 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 AC011484.1-201ENST00000377652 1995 ntBASIC20.3■□□□□ 0.84
CDC7O00311 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
CDC7O00311 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDC7O00311 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDC7O00311 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 AC120498.10-201ENST00000621827 505 ntBASIC20.3■□□□□ 0.84
CDC7O00311 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC7O00311 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDC7O00311 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDC7O00311 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC7O00311 AC007225.1-201ENST00000566331 1836 ntBASIC20.3■□□□□ 0.84
CDC7O00311 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms