Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 AP006587.3-201ENST00000525742 1516 ntBASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 AC120498.10-201ENST00000621827 505 ntBASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBAL3A6NHL2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 AC073210.2-201ENST00000430369 194 ntBASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 EEF1DP3-203ENST00000566025 782 ntBASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TUBAL3A6NHL2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 FAM201B-201ENST00000458407 597 ntBASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBAL3A6NHL2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 MIR4758-201ENST00000577688 71 ntBASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 AC008694.1-202ENST00000636953 945 ntBASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TUBAL3A6NHL2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 AC008175.2-201ENST00000612840 297 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms