Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC112907.3-201ENST00000577781 2400 ntBASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC126544.1-201ENST00000580842 1059 ntBASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV5-5A0A0J9YX44 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-5A0A0J9YX44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 EEF1DP3-203ENST00000566025 782 ntBASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC105233.4-201ENST00000642045 216 ntBASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-5A0A0J9YX44 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 AP004607.4-201ENST00000530158 1459 ntBASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC053503.5-201ENST00000601508 636 ntBASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-5A0A0J9YX44 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms