Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 AC053503.5-201ENST00000601508 636 ntBASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 AL354811.1-201ENST00000610286 706 ntBASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-2A0A0B4J237 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 AC121338.2-201ENST00000622535 1744 ntBASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-2A0A0B4J237 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-2A0A0B4J237 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-2A0A0B4J237 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 MIR6084-201ENST00000622012 110 ntBASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 AC061975.6-201ENST00000579045 1553 ntBASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-2A0A0B4J237 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 AC142381.2-201ENST00000566120 298 ntBASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 AL358852.1-201ENST00000623174 1268 ntBASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-2A0A0B4J237 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms