Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 KRT18P11-201ENST00000435214 1283 ntBASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC243732.1-201ENST00000612648 864 ntBASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 RARRES2P11-201ENST00000635158 484 ntBASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC011484.1-201ENST00000377652 1995 ntBASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV7-1A0A0A6YYK4 AC006128.1-201ENST00000624704 1661 ntBASIC16.08■□□□□ 0.17
TRBV7-1A0A0A6YYK4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRBV7-1A0A0A6YYK4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.08■□□□□ 0.17
TRBV7-1A0A0A6YYK4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
TRBV7-1A0A0A6YYK4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC026271.2-201ENST00000428091 497 ntBASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MIR5787-201ENST00000611784 55 ntBASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 UBE2DNL-204ENST00000602536 740 ntBASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms