Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV8-1A0A0A6YYK1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FP700111.2-201ENST00000619190 1892 ntBASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC136469.2-201ENST00000623944 1028 ntBASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AL512408.1-201ENST00000569378 2000 ntBASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms