Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SLC1A1P43005 CYP19A1-204ENST00000405913 1697 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 TROAP-206ENST00000547923 1652 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 CT83-201ENST00000371894 548 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 MMP26-202ENST00000380390 1189 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC016956.1-201ENST00000393026 1108 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC01643-201ENST00000412218 757 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC130710.1-202ENST00000428280 853 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 KCNH1-IT1-201ENST00000438597 626 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC10.26□□□□□ -0.77
SLC1A1P43005 NME9-208ENST00000484930 825 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 SSR2-213ENST00000496742 825 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 DUX4L51-201ENST00000508172 1109 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC005823.1-201ENST00000510059 585 ntTSL 4 BASIC10.26□□□□□ -0.77
SLC1A1P43005 PFDN1-203ENST00000510217 1091 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 HPYR1-201ENST00000520457 982 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 AC005832.4-201ENST00000536588 818 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC127070.4-201ENST00000536775 385 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC02467-201ENST00000542804 637 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC005476.2-201ENST00000555771 509 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC002306.1-201ENST00000559614 937 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 ASIP-202ENST00000568305 610 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 BOD1P2-201ENST00000578494 481 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 MIR4663-201ENST00000582039 76 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AL591222.3-201ENST00000611241 756 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 MIR6081-201ENST00000613785 97 ntBASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC01002-203ENST00000631484 754 ntTSL 3 BASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC01002-217ENST00000632405 600 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 LINC01002-230ENST00000633592 568 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 GHR-212ENST00000620156 4529 ntTSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SLC1A1P43005 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SLC1A1P43005 AC007608.1-201ENST00000379963 2469 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC10.26□□□□□ -0.77
SLC1A1P43005 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 PRNT-202ENST00000418528 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AC025678.3-201ENST00000623619 4824 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 KRTAP21-1-201ENST00000335093 599 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SLC1A1P43005 MIR370-201ENST00000362135 75 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 RN7SKP134-201ENST00000363960 269 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AL136968.1-201ENST00000403053 946 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 DSTNP1-201ENST00000419906 465 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 OR4D8P-201ENST00000431137 930 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 RNASE11-204ENST00000432835 946 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 AC099066.3-201ENST00000434499 301 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 PNLIPP1-201ENST00000439233 675 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 SNX25P1-201ENST00000441817 834 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC093422.1-201ENST00000448403 552 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC009245.1-201ENST00000456481 862 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 RN7SL125P-201ENST00000480790 294 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AC140847.3-201ENST00000542491 708 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC007595.1-201ENST00000576710 483 ntTSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC10.25□□□□□ -0.77
SLC1A1P43005 RN7SL73P-201ENST00000585239 252 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC011467.3-201ENST00000599738 429 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 ZNF761-204ENST00000610928 938 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 AP000787.3-201ENST00000634407 307 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 LRRC37A4P-202ENST00000581296 5372 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC10.25□□□□□ -0.77
SLC1A1P43005 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 SSBP3-AS1-201ENST00000361350 2624 ntBASIC10.25□□□□□ -0.77
SLC1A1P43005 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC10.25□□□□□ -0.77
SLC1A1P43005 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SLC1A1P43005 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms