Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 RNA5SP174-201ENST00000362702 118 ntBASIC9.01□□□□□ -0.97
P04436 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 ATP5G1P8-201ENST00000416294 294 ntBASIC9.01□□□□□ -0.97
P04436 AC021028.1-201ENST00000417559 598 ntTSL 2 BASIC9.01□□□□□ -0.97
P04436 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC9.01□□□□□ -0.97
P04436 AC112247.1-201ENST00000436268 657 ntBASIC9.01□□□□□ -0.97
P04436 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.01□□□□□ -0.97
P04436 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC9.01□□□□□ -0.97
P04436 AC093162.2-201ENST00000501107 704 ntBASIC9.01□□□□□ -0.97
P04436 AL162431.3-201ENST00000503142 537 ntBASIC9.01□□□□□ -0.97
P04436 AL390726.2-201ENST00000504791 343 ntBASIC9.01□□□□□ -0.97
P04436 RACK1-225ENST00000511566 825 ntTSL 3 BASIC9.01□□□□□ -0.97
P04436 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC9.01□□□□□ -0.97
P04436 AC090568.2-201ENST00000523254 497 ntTSL 4 BASIC9.01□□□□□ -0.97
P04436 AC005186.1-201ENST00000534849 570 ntTSL 4 BASIC9.01□□□□□ -0.97
P04436 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
P04436 AC090502.1-203ENST00000551726 554 ntTSL 4 BASIC9.01□□□□□ -0.97
P04436 AC112236.1-201ENST00000561977 1098 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 AC131391.1-201ENST00000565359 520 ntTSL 2 BASIC9.01□□□□□ -0.97
P04436 RN7SL493P-201ENST00000580401 299 ntBASIC9.01□□□□□ -0.97
P04436 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
P04436 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC9.01□□□□□ -0.97
P04436 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC9.01□□□□□ -0.97
P04436 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC9.01□□□□□ -0.97
P04436 AC007228.1-201ENST00000600036 142 ntBASIC9.01□□□□□ -0.97
P04436 AP002840.2-201ENST00000602900 640 ntBASIC9.01□□□□□ -0.97
P04436 TP53TG1_1.1-201ENST00000612852 152 ntBASIC9.01□□□□□ -0.97
P04436 ALOX5AP-203ENST00000617770 1224 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 AC126915.3-201ENST00000620111 208 ntBASIC9.01□□□□□ -0.97
P04436 AC091953.1-201ENST00000624775 296 ntBASIC9.01□□□□□ -0.97
P04436 SMIM7-221ENST00000627144 2171 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC9.01□□□□□ -0.97
P04436 B3GALNT1-201ENST00000320474 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
P04436 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 SEC14L3-201ENST00000215812 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 AC026765.2-201ENST00000551875 1330 ntTSL 2 BASIC9.01□□□□□ -0.97
P04436 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 ADAM1A-201ENST00000424240 2129 ntBASIC9.01□□□□□ -0.97
P04436 STOML3-202ENST00000423210 1997 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
P04436 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC9.01□□□□□ -0.97
P04436 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
P04436 CYP19A1-204ENST00000405913 1697 ntTSL 1 (best) BASIC9□□□□□ -0.97
P04436 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
P04436 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
P04436 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.97
P04436 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
P04436 AC016526.3-201ENST00000624275 3931 ntBASIC9□□□□□ -0.97
P04436 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC9□□□□□ -0.97
P04436 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
P04436 TRIM6-208ENST00000506134 1398 ntTSL 2 BASIC9□□□□□ -0.97
P04436 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC9□□□□□ -0.97
P04436 BHLHB9-201ENST00000361229 3974 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 ZNF558-201ENST00000301475 3014 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC9□□□□□ -0.97
P04436 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 SRGAP2-215ENST00000605610 3212 ntTSL 2 BASIC9□□□□□ -0.97
P04436 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC9□□□□□ -0.97
P04436 BORCS7-202ENST00000369883 838 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 SPP2-202ENST00000373368 860 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
P04436 PHKA1-AS1-201ENST00000420998 598 ntTSL 2 BASIC9□□□□□ -0.97
P04436 KRT18P49-201ENST00000427083 832 ntBASIC9□□□□□ -0.97
P04436 AC012456.2-201ENST00000431500 561 ntTSL 5 BASIC9□□□□□ -0.97
P04436 FERP1-201ENST00000436391 793 ntBASIC9□□□□□ -0.97
P04436 APCDD1L-AS1-205ENST00000439558 648 ntTSL 5 BASIC9□□□□□ -0.97
P04436 AC092634.3-201ENST00000450544 637 ntTSL 1 (best) BASIC9□□□□□ -0.97
P04436 GCNT1P3-201ENST00000450607 575 ntBASIC9□□□□□ -0.97
P04436 LINC02248-202ENST00000451579 606 ntTSL 3 BASIC9□□□□□ -0.97
P04436 AL133406.2-201ENST00000452363 1198 ntTSL 2 BASIC9□□□□□ -0.97
P04436 ID2-AS1-207ENST00000455965 794 ntTSL 4 BASIC9□□□□□ -0.97
P04436 AL355497.2-201ENST00000456346 880 ntTSL 5 BASIC9□□□□□ -0.97
P04436 RN7SL108P-201ENST00000481903 297 ntBASIC9□□□□□ -0.97
P04436 RN7SL344P-201ENST00000485522 296 ntBASIC9□□□□□ -0.97
P04436 HNRNPA1P23-201ENST00000491091 1133 ntBASIC9□□□□□ -0.97
P04436 AF250324.1-202ENST00000511785 979 ntTSL 2 BASIC9□□□□□ -0.97
P04436 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC9□□□□□ -0.97
P04436 EIF1AD-202ENST00000525767 743 ntTSL 5 BASIC9□□□□□ -0.97
P04436 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC9□□□□□ -0.97
P04436 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC9□□□□□ -0.97
P04436 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC9□□□□□ -0.97
P04436 AC025278.2-201ENST00000598153 1063 ntBASIC9□□□□□ -0.97
P04436 AC007551.2-201ENST00000613889 389 ntBASIC9□□□□□ -0.97
P04436 HIST1H4L-201ENST00000618305 312 ntAPPRIS P1 BASIC9□□□□□ -0.97
P04436 AC073255.1-201ENST00000624149 177 ntBASIC9□□□□□ -0.97
P04436 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC9□□□□□ -0.97
P04436 LINC00595-209ENST00000634389 549 ntTSL 4 BASIC9□□□□□ -0.97
P04436 BBS4-202ENST00000395205 2450 ntTSL 1 (best) BASIC9□□□□□ -0.97
P04436 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9□□□□□ -0.97
P04436 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
P04436 C9orf84-202ENST00000374283 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
P04436 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms