Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MS4A6A-216ENST00000532169 1136 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TRHDE-AS1-204ENST00000550334 403 ntTSL 3 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TGIF2LX-202ENST00000561129 928 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC016168.2-203ENST00000563583 623 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC005277.1-201ENST00000582915 335 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 DMAC2-214ENST00000595425 572 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC008554.1-201ENST00000598131 811 ntTSL 3 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZNF430-206ENST00000599548 595 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 LINC00649-217ENST00000616030 714 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 STAG3L2-204ENST00000622110 885 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 LINC01943-202ENST00000628090 926 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 NBDY-204ENST00000637096 896 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TREM1-207ENST00000591620 2048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC023078.6-201ENST00000525272 1718 ntBASIC9.13□□□□□ -0.95
SNX18Q96RF0 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZNF397-203ENST00000355632 2162 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 TEX9-201ENST00000352903 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC9.13□□□□□ -0.95
SNX18Q96RF0 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 GSK3B-202ENST00000316626 1636 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SNX18Q96RF0 ZCCHC9-202ENST00000380199 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 FKBP4P2-201ENST00000598909 1371 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC023301.1-201ENST00000584727 2206 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC099066.2-201ENST00000448264 1530 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 F11-202ENST00000264692 1916 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 TSPAN7-201ENST00000286824 1270 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 URM1-201ENST00000372847 753 ntTSL 3 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AL021407.2-201ENST00000408034 972 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 MICD-202ENST00000413248 813 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AL121892.1-201ENST00000422574 833 ntTSL 3 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC095030.1-201ENST00000436206 377 ntTSL 3 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 PLAC8-204ENST00000505406 1025 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 CA3-AS1-202ENST00000521761 591 ntTSL 4 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC005906.1-201ENST00000537214 554 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 OR11G1P-201ENST00000557042 968 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AL354861.2-202ENST00000580326 483 ntTSL 3 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 ZNF91-212ENST00000599743 662 ntTSL 3 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AL445250.1-205ENST00000641631 1094 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 EFCAB11-209ENST00000556005 1856 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 JKAMP-203ENST00000425728 1636 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 ITGBL1-201ENST00000376162 2007 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 CLUAP1-203ENST00000572600 2221 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SNX18Q96RF0 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 ETNPPL-210ENST00000512646 1561 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SNX18Q96RF0 AC063944.2-201ENST00000464192 1368 ntBASIC9.12□□□□□ -0.95
SNX18Q96RF0 VPS11-208ENST00000621676 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 BRD7P2-201ENST00000466133 1944 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 WARS-201ENST00000344102 2690 ntTSL 5 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 AC087203.3-201ENST00000602981 1547 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 AL391244.3-201ENST00000607307 1523 ntBASIC9.11□□□□□ -0.95
SNX18Q96RF0 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SNX18Q96RF0 ZNF766-206ENST00000599581 2065 ntTSL 2 BASIC9.11□□□□□ -0.95
SNX18Q96RF0 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms