Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNA5SP376-201ENST00000390949 112 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC073091.1-201ENST00000398059 864 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPS19P1-201ENST00000415286 434 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AL139327.3-201ENST00000433721 379 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPSAP26-201ENST00000442699 741 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 GFOD1-AS1-201ENST00000446001 332 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC093714.1-201ENST00000470532 1257 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPL12P36-201ENST00000470623 478 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 RPS10P5-201ENST00000492704 531 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC091805.1-201ENST00000498395 342 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SNORA68.4-201ENST00000516649 129 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC016168.2-202ENST00000564292 610 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC026461.3-201ENST00000569778 444 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC108134.2-201ENST00000570843 748 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 LSP1P1-201ENST00000599825 133 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 TRAC-201ENST00000611116 976 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 LINC01796-201ENST00000611915 709 ntTSL 3 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC097478.3-201ENST00000620420 872 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AL356585.1-201ENST00000624447 897 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 CAPN8-202ENST00000366873 2596 ntTSL 5 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 ARCN1-205ENST00000614498 2238 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 COL6A3-205ENST00000392004 4037 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 AC012464.3-201ENST00000604017 2773 ntBASIC10.53□□□□□ -0.72
LMO3Q8TAP4 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LMO3Q8TAP4 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LMO3Q8TAP4 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LMO3Q8TAP4 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
LMO3Q8TAP4 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LMO3Q8TAP4 ZNF506-203ENST00000540806 1424 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 OR52K2-201ENST00000325719 1067 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 REG3A-202ENST00000393878 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 GGCT-204ENST00000409390 767 ntTSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AP000552.2-201ENST00000422450 689 ntBASIC10.52□□□□□ -0.73
LMO3Q8TAP4 Z83839.1-201ENST00000423412 630 ntBASIC10.52□□□□□ -0.73
LMO3Q8TAP4 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 MBL1P-202ENST00000497731 758 ntBASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AC093107.2-201ENST00000603668 445 ntBASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AC006547.1-201ENST00000628442 550 ntTSL 5 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ACTN4P2-201ENST00000473049 1892 ntBASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 AK2-215ENST00000629371 3576 ntTSL 3 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 ODF2-210ENST00000444119 2418 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LMO3Q8TAP4 CD59-213ENST00000533403 1847 ntTSL 3 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 HSPB3-201ENST00000302005 784 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 RN7SKP172-201ENST00000411341 298 ntBASIC10.51□□□□□ -0.73
LMO3Q8TAP4 AC005301.1-201ENST00000423580 875 ntTSL 5 BASIC10.51□□□□□ -0.73
LMO3Q8TAP4 AC073346.1-201ENST00000441928 651 ntTSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms