Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 AC010536.3-201ENST00000620306 533 ntBASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 RBM17P2-201ENST00000616397 1405 ntBASIC21.04■□□□□ 0.96
RAI2Q9Y5P3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 AC245052.3-201ENST00000450182 901 ntBASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 CD99P1-205ENST00000527459 561 ntBASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAI2Q9Y5P3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
RAI2Q9Y5P3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 TERF1P5-201ENST00000477545 1207 ntBASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 PKD1P6-201ENST00000343738 4769 ntBASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAI2Q9Y5P3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 AL049796.1-201ENST00000565336 1766 ntBASIC21■□□□□ 0.95
RAI2Q9Y5P3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21■□□□□ 0.95
RAI2Q9Y5P3 DUX4L16-201ENST00000555130 1264 ntBASIC21■□□□□ 0.95
RAI2Q9Y5P3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 AC243732.1-201ENST00000612648 864 ntBASIC21■□□□□ 0.95
RAI2Q9Y5P3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAI2Q9Y5P3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAI2Q9Y5P3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 NCF1B-203ENST00000435988 1254 ntBASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
RAI2Q9Y5P3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms