Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN16Q9Y5I7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 AL162412.1-201ENST00000567129 965 ntBASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 AC005181.1-201ENST00000604782 1256 ntBASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 AC016405.3-201ENST00000607710 860 ntBASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLDN16Q9Y5I7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 AL591742.1-201ENST00000604433 565 ntBASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN16Q9Y5I7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN16Q9Y5I7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 AC005229.4-201ENST00000610085 2198 ntBASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN16Q9Y5I7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 NCF1B-203ENST00000435988 1254 ntBASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLDN16Q9Y5I7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 AC133552.2-202ENST00000575694 574 ntBASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN16Q9Y5I7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms