Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
AP4S1Q9Y587 AC099778.1-201ENST00000568593 1911 ntBASIC19.63■□□□□ 0.73
AP4S1Q9Y587 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
AP4S1Q9Y587 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 AC018445.3-201ENST00000624177 1945 ntBASIC19.61■□□□□ 0.73
AP4S1Q9Y587 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 TSPY13P-201ENST00000338964 914 ntBASIC19.61■□□□□ 0.73
AP4S1Q9Y587 YBX1P4-201ENST00000392794 808 ntBASIC19.61■□□□□ 0.73
AP4S1Q9Y587 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 AC010141.3-201ENST00000456659 717 ntBASIC19.61■□□□□ 0.73
AP4S1Q9Y587 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 AP004607.7-201ENST00000527152 1677 ntBASIC19.61■□□□□ 0.73
AP4S1Q9Y587 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP4S1Q9Y587 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 ABHD17AP5-201ENST00000580133 923 ntBASIC19.6■□□□□ 0.73
AP4S1Q9Y587 AC241377.3-202ENST00000626088 1088 ntBASIC19.6■□□□□ 0.73
AP4S1Q9Y587 AC241585.3-202ENST00000628937 1088 ntBASIC19.6■□□□□ 0.73
AP4S1Q9Y587 AC245100.8-202ENST00000629247 1058 ntBASIC19.6■□□□□ 0.73
AP4S1Q9Y587 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.6■□□□□ 0.73
AP4S1Q9Y587 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 HSD17B1P1-201ENST00000590052 955 ntBASIC19.59■□□□□ 0.73
AP4S1Q9Y587 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP4S1Q9Y587 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 BX323043.1-201ENST00000641006 1765 ntBASIC19.58■□□□□ 0.73
AP4S1Q9Y587 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
AP4S1Q9Y587 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 BX664725.1-201ENST00000438252 379 ntBASIC19.58■□□□□ 0.72
AP4S1Q9Y587 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 AC092028.1-203ENST00000608262 953 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms