Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN8AQ9UQD0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 AC068338.2-201ENST00000563278 1430 ntBASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 GUSBP6-202ENST00000438529 1198 ntBASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 AC231657.2-201ENST00000624556 255 ntBASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SCN8AQ9UQD0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN8AQ9UQD0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 AC011767.1-201ENST00000617410 1153 ntBASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN8AQ9UQD0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 AC142086.2-201ENST00000569753 217 ntBASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SCN8AQ9UQD0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
SCN8AQ9UQD0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN8AQ9UQD0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN8AQ9UQD0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN8AQ9UQD0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SCN8AQ9UQD0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCN8AQ9UQD0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN8AQ9UQD0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN8AQ9UQD0 AC005229.4-201ENST00000610085 2198 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms