Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 AC004911.1-201ENST00000416316 871 ntBASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 AC091799.1-201ENST00000422823 811 ntBASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 DUX4L16-201ENST00000555130 1264 ntBASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHA4Q9UN74 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA4Q9UN74 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 AC092666.2-201ENST00000613287 246 ntBASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PCDHA4Q9UN74 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA4Q9UN74 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 CNN2P6-201ENST00000439038 900 ntBASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 AC013268.1-206ENST00000638368 961 ntBASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 AC112229.1-201ENST00000639295 961 ntBASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA4Q9UN74 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 AC007322.4-201ENST00000509611 723 ntBASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 AC080038.1-201ENST00000611274 1154 ntBASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA4Q9UN74 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA4Q9UN74 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 AC121338.2-201ENST00000622535 1744 ntBASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA4Q9UN74 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms