Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 AC024257.2-201ENST00000549699 147 ntBASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 AL136162.1-201ENST00000607711 1078 ntBASIC20.83■□□□□ 0.93
CPSF2Q9P2I0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 LINC01006-201ENST00000333319 2292 ntBASIC20.83■□□□□ 0.92
CPSF2Q9P2I0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 AC126544.1-201ENST00000580842 1059 ntBASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 SMUG1P1-201ENST00000590640 811 ntBASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF2Q9P2I0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 AC233992.3-201ENST00000607491 485 ntBASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF2Q9P2I0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 LINC01521-201ENST00000504184 1943 ntBASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
CPSF2Q9P2I0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.79■□□□□ 0.92
CPSF2Q9P2I0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms