Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 IKBKGP1-201ENST00000612193 1073 ntBASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 BID-214ENST00000617586 542 ntTSL 5 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 AC092437.1-201ENST00000624794 1048 ntBASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZDHHC3Q9NYG2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 TERF1P5-201ENST00000477545 1207 ntBASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 AC011767.1-201ENST00000617410 1153 ntBASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZDHHC3Q9NYG2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZDHHC3Q9NYG2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 AC091799.1-201ENST00000422823 811 ntBASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.53■□□□□ 0.88
ZDHHC3Q9NYG2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.52■□□□□ 0.88
ZDHHC3Q9NYG2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ZDHHC3Q9NYG2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 AC121338.2-201ENST00000622535 1744 ntBASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 DUX4L16-201ENST00000555130 1264 ntBASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ZDHHC3Q9NYG2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms