Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 AC027682.1-201ENST00000562846 899 ntBASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCM2LQ9NUG4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 AL034346.1-201ENST00000568244 1277 ntBASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 AC008764.7-201ENST00000593779 1081 ntBASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
CCM2LQ9NUG4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2LQ9NUG4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 AC020907.5-201ENST00000624372 1936 ntBASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCM2LQ9NUG4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2LQ9NUG4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2LQ9NUG4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms