Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 AC024257.2-201ENST00000549699 147 ntBASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 EEF1DP3-203ENST00000566025 782 ntBASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC52A3Q9NQ40 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 AC126544.1-201ENST00000580842 1059 ntBASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC52A3Q9NQ40 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC52A3Q9NQ40 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 AL136116.3-201ENST00000402907 1138 ntBASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 AC105233.4-201ENST00000642045 216 ntBASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 AC061975.6-201ENST00000579045 1553 ntBASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC52A3Q9NQ40 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 AC053503.5-201ENST00000601508 636 ntBASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC52A3Q9NQ40 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms