Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 KRASP1-201ENST00000407852 552 ntBASIC19.65■□□□□ 0.74
CHD8Q9HCK8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD8Q9HCK8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHD8Q9HCK8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHD8Q9HCK8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CHD8Q9HCK8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 AC120498.8-201ENST00000614275 531 ntBASIC19.64■□□□□ 0.73
CHD8Q9HCK8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 AC104076.2-201ENST00000448912 469 ntBASIC19.64■□□□□ 0.73
CHD8Q9HCK8 AP000525.1-201ENST00000608286 694 ntBASIC19.64■□□□□ 0.73
CHD8Q9HCK8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHD8Q9HCK8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AL137013.1-201ENST00000432946 1228 ntBASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AC079598.2-202ENST00000546624 1451 ntBASIC19.63■□□□□ 0.73
CHD8Q9HCK8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.63■□□□□ 0.73
CHD8Q9HCK8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 AC110285.5-201ENST00000611501 352 ntBASIC19.62■□□□□ 0.73
CHD8Q9HCK8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 AL390955.1-201ENST00000428694 934 ntBASIC19.62■□□□□ 0.73
CHD8Q9HCK8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 NUDT16P1-203ENST00000513809 620 ntBASIC19.62■□□□□ 0.73
CHD8Q9HCK8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 MYC-208ENST00000641036 567 ntBASIC19.62■□□□□ 0.73
CHD8Q9HCK8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.62■□□□□ 0.73
CHD8Q9HCK8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 AC087633.2-202ENST00000565166 1439 ntBASIC19.61■□□□□ 0.73
CHD8Q9HCK8 AL034346.1-201ENST00000568244 1277 ntBASIC19.61■□□□□ 0.73
CHD8Q9HCK8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 LINC01960-201ENST00000563759 1884 ntBASIC19.61■□□□□ 0.73
CHD8Q9HCK8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD8Q9HCK8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms