Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 AC097381.1-201ENST00000429019 1296 ntBASIC17.55■□□□□ 0.4
HES4Q9HCC6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 AP001160.3-201ENST00000601484 763 ntBASIC17.55■□□□□ 0.4
HES4Q9HCC6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
HES4Q9HCC6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HES4Q9HCC6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HES4Q9HCC6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HES4Q9HCC6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 KRT18P20-201ENST00000548986 1279 ntBASIC17.54■□□□□ 0.4
HES4Q9HCC6 MIR6821-201ENST00000617625 74 ntBASIC17.54■□□□□ 0.4
HES4Q9HCC6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HES4Q9HCC6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HES4Q9HCC6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HES4Q9HCC6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 KRT18P61-201ENST00000585825 1298 ntBASIC17.53■□□□□ 0.4
HES4Q9HCC6 AC120498.10-201ENST00000621827 505 ntBASIC17.53■□□□□ 0.4
HES4Q9HCC6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.53■□□□□ 0.4
HES4Q9HCC6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HES4Q9HCC6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HES4Q9HCC6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
HES4Q9HCC6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
HES4Q9HCC6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HES4Q9HCC6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HES4Q9HCC6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.52■□□□□ 0.39
HES4Q9HCC6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HES4Q9HCC6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HES4Q9HCC6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.52■□□□□ 0.39
HES4Q9HCC6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 RARRES2P11-201ENST00000635158 484 ntBASIC17.51■□□□□ 0.39
HES4Q9HCC6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HES4Q9HCC6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.51■□□□□ 0.39
HES4Q9HCC6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HES4Q9HCC6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HES4Q9HCC6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HES4Q9HCC6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HES4Q9HCC6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HES4Q9HCC6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms