Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF556Q9HAH1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 RARRES2P1-201ENST00000474487 481 ntBASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 AP005435.1-201ENST00000529293 1178 ntBASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF556Q9HAH1 HCG11-201ENST00000411553 5696 ntBASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
ZNF556Q9HAH1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF556Q9HAH1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF556Q9HAH1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 AL391422.3-201ENST00000603791 2761 ntBASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF556Q9HAH1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF556Q9HAH1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms