Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC68Q9H2F9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 AC123595.1-201ENST00000440769 1046 ntBASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC68Q9H2F9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 YBX1P1-201ENST00000445822 960 ntBASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 AP004607.4-201ENST00000530158 1459 ntBASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CCDC68Q9H2F9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC68Q9H2F9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 POU5F1P4-201ENST00000413175 1085 ntBASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC68Q9H2F9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 AC120498.10-201ENST00000621827 505 ntBASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC68Q9H2F9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC68Q9H2F9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC68Q9H2F9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC68Q9H2F9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC68Q9H2F9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 ZNRF2P3-201ENST00000424200 374 ntBASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 AC061975.6-201ENST00000579045 1553 ntBASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms