Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 AP001330.3-201ENST00000520123 633 ntBASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR2J3Q9H1A7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 AC091305.1-201ENST00000479476 895 ntBASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR2J3Q9H1A7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 MIR939-201ENST00000401314 82 ntBASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 PLK5-205ENST00000642079 1969 ntBASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR2J3Q9H1A7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
POLR2J3Q9H1A7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR2J3Q9H1A7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 AC053503.5-201ENST00000601508 636 ntBASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR2J3Q9H1A7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 AP005212.1-201ENST00000581547 1997 ntBASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 AC012414.1-201ENST00000556676 535 ntBASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 EEF1DP3-203ENST00000566025 782 ntBASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR2J3Q9H1A7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms