Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.52■□□□□ 0.4
ALX4Q9H161 AC121338.2-201ENST00000622535 1744 ntBASIC17.52■□□□□ 0.39
ALX4Q9H161 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALX4Q9H161 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.52■□□□□ 0.39
ALX4Q9H161 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALX4Q9H161 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALX4Q9H161 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ALX4Q9H161 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.51■□□□□ 0.39
ALX4Q9H161 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.51■□□□□ 0.39
ALX4Q9H161 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
ALX4Q9H161 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALX4Q9H161 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.51■□□□□ 0.39
ALX4Q9H161 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ALX4Q9H161 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ALX4Q9H161 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.51■□□□□ 0.39
ALX4Q9H161 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.51■□□□□ 0.39
ALX4Q9H161 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALX4Q9H161 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALX4Q9H161 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
ALX4Q9H161 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.5■□□□□ 0.39
ALX4Q9H161 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.5■□□□□ 0.39
ALX4Q9H161 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.5■□□□□ 0.39
ALX4Q9H161 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.5■□□□□ 0.39
ALX4Q9H161 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.5■□□□□ 0.39
ALX4Q9H161 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ALX4Q9H161 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.5■□□□□ 0.39
ALX4Q9H161 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ALX4Q9H161 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALX4Q9H161 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
ALX4Q9H161 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ALX4Q9H161 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
ALX4Q9H161 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.49■□□□□ 0.39
ALX4Q9H161 AL512408.1-201ENST00000569378 2000 ntBASIC17.49■□□□□ 0.39
ALX4Q9H161 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ALX4Q9H161 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 AL034346.1-201ENST00000568244 1277 ntBASIC17.49■□□□□ 0.39
ALX4Q9H161 AC068587.7-201ENST00000641602 218 ntBASIC17.49■□□□□ 0.39
ALX4Q9H161 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.49■□□□□ 0.39
ALX4Q9H161 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.49■□□□□ 0.39
ALX4Q9H161 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALX4Q9H161 AC099778.1-201ENST00000568593 1911 ntBASIC17.49■□□□□ 0.39
ALX4Q9H161 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALX4Q9H161 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ALX4Q9H161 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.48■□□□□ 0.39
ALX4Q9H161 AC112907.3-201ENST00000577781 2400 ntBASIC17.48■□□□□ 0.39
ALX4Q9H161 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 SRD5A1P1-201ENST00000442297 786 ntBASIC17.48■□□□□ 0.39
ALX4Q9H161 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ALX4Q9H161 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALX4Q9H161 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
ALX4Q9H161 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
ALX4Q9H161 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.48■□□□□ 0.39
ALX4Q9H161 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ALX4Q9H161 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.48■□□□□ 0.39
ALX4Q9H161 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ALX4Q9H161 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALX4Q9H161 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.47■□□□□ 0.39
ALX4Q9H161 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ALX4Q9H161 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALX4Q9H161 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms