Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 SPCS2P3-201ENST00000500401 656 ntBASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 AC004687.1-201ENST00000579003 1625 ntBASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 AC087289.5-201ENST00000586076 3175 ntBASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 AF131216.4-201ENST00000638924 1588 ntBASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AP005212.1-201ENST00000581547 1997 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 GPX1-201ENST00000419349 1106 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DUX4L9-201ENST00000449051 1259 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AL592293.1-201ENST00000502889 1188 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AC019171.1-201ENST00000601251 1056 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AFG3L1P-217ENST00000557444 2447 ntBASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms