Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VGLL1Q99990 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
VGLL1Q99990 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
VGLL1Q99990 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VGLL1Q99990 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
VGLL1Q99990 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VGLL1Q99990 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VGLL1Q99990 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VGLL1Q99990 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VGLL1Q99990 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VGLL1Q99990 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VGLL1Q99990 AP005212.1-201ENST00000581547 1997 ntBASIC15.7■□□□□ 0.1
VGLL1Q99990 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 BX842568.3-201ENST00000418104 571 ntBASIC15.7■□□□□ 0.1
VGLL1Q99990 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.7■□□□□ 0.1
VGLL1Q99990 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.7■□□□□ 0.1
VGLL1Q99990 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.7■□□□□ 0.1
VGLL1Q99990 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VGLL1Q99990 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VGLL1Q99990 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 GABARAPL3-202ENST00000624044 1851 ntBASIC15.69■□□□□ 0.1
VGLL1Q99990 AIRN-201ENST00000601203 4374 ntBASIC15.69■□□□□ 0.1
VGLL1Q99990 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 AC121338.2-201ENST00000622535 1744 ntBASIC15.69■□□□□ 0.1
VGLL1Q99990 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 AL136116.3-201ENST00000402907 1138 ntBASIC15.69■□□□□ 0.1
VGLL1Q99990 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.69■□□□□ 0.1
VGLL1Q99990 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.69■□□□□ 0.1
VGLL1Q99990 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.69■□□□□ 0.1
VGLL1Q99990 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.69■□□□□ 0.1
VGLL1Q99990 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VGLL1Q99990 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VGLL1Q99990 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VGLL1Q99990 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VGLL1Q99990 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VGLL1Q99990 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
VGLL1Q99990 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL1Q99990 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VGLL1Q99990 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.68■□□□□ 0.1
VGLL1Q99990 AC126544.1-201ENST00000580842 1059 ntBASIC15.68■□□□□ 0.1
VGLL1Q99990 AC233992.3-201ENST00000607491 485 ntBASIC15.68■□□□□ 0.1
VGLL1Q99990 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VGLL1Q99990 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.68■□□□□ 0.1
VGLL1Q99990 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VGLL1Q99990 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.68■□□□□ 0.1
VGLL1Q99990 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
VGLL1Q99990 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 UNC93B3-201ENST00000308076 687 ntBASIC15.67■□□□□ 0.1
VGLL1Q99990 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL1Q99990 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL1Q99990 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.67■□□□□ 0.1
VGLL1Q99990 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.67■□□□□ 0.1
VGLL1Q99990 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VGLL1Q99990 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL1Q99990 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms