Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK1Q99986 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VRK1Q99986 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK1Q99986 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.25■□□□□ 0.51
VRK1Q99986 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VRK1Q99986 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.24■□□□□ 0.51
VRK1Q99986 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.24■□□□□ 0.51
VRK1Q99986 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.24■□□□□ 0.51
VRK1Q99986 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.24■□□□□ 0.51
VRK1Q99986 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VRK1Q99986 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.24■□□□□ 0.51
VRK1Q99986 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
VRK1Q99986 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK1Q99986 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VRK1Q99986 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
VRK1Q99986 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VRK1Q99986 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK1Q99986 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK1Q99986 KRT18P11-201ENST00000435214 1283 ntBASIC18.23■□□□□ 0.51
VRK1Q99986 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.23■□□□□ 0.51
VRK1Q99986 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.23■□□□□ 0.51
VRK1Q99986 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.23■□□□□ 0.51
VRK1Q99986 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VRK1Q99986 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.23■□□□□ 0.51
VRK1Q99986 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VRK1Q99986 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VRK1Q99986 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK1Q99986 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.22■□□□□ 0.51
VRK1Q99986 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.22■□□□□ 0.51
VRK1Q99986 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.22■□□□□ 0.51
VRK1Q99986 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VRK1Q99986 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VRK1Q99986 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
VRK1Q99986 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.21■□□□□ 0.51
VRK1Q99986 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.21■□□□□ 0.51
VRK1Q99986 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VRK1Q99986 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.21■□□□□ 0.51
VRK1Q99986 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 AC010542.4-201ENST00000563151 1910 ntBASIC18.21■□□□□ 0.51
VRK1Q99986 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VRK1Q99986 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VRK1Q99986 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
VRK1Q99986 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
VRK1Q99986 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VRK1Q99986 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
VRK1Q99986 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
VRK1Q99986 AC087742.1-201ENST00000575880 1738 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms