Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.2■□□□□ 0.66
TM9SF2Q99805 AL034346.1-201ENST00000568244 1277 ntBASIC19.2■□□□□ 0.66
TM9SF2Q99805 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.2■□□□□ 0.66
TM9SF2Q99805 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TM9SF2Q99805 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF2Q99805 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TM9SF2Q99805 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 AC090192.1-201ENST00000517740 490 ntBASIC19.18■□□□□ 0.66
TM9SF2Q99805 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF2Q99805 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TM9SF2Q99805 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 LINC01521-201ENST00000504184 1943 ntBASIC19.17■□□□□ 0.66
TM9SF2Q99805 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF2Q99805 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.17■□□□□ 0.66
TM9SF2Q99805 AL391422.3-201ENST00000603791 2761 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 KRT87P-202ENST00000534226 1464 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 AC006015.1-201ENST00000429970 570 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 KRT18P61-201ENST00000585825 1298 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 AP004607.7-201ENST00000527152 1677 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.16■□□□□ 0.66
TM9SF2Q99805 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF2Q99805 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF2Q99805 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF2Q99805 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TM9SF2Q99805 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms