Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC38A3Q99624 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC38A3Q99624 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC38A3Q99624 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC38A3Q99624 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC38A3Q99624 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC38A3Q99624 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC38A3Q99624 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC38A3Q99624 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLC38A3Q99624 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC38A3Q99624 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC38A3Q99624 TSPY20P-201ENST00000450910 630 ntBASIC20.15■□□□□ 0.82
SLC38A3Q99624 FAM21FP-204ENST00000608637 956 ntBASIC20.15■□□□□ 0.82
SLC38A3Q99624 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC38A3Q99624 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SLC38A3Q99624 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC38A3Q99624 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC38A3Q99624 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC38A3Q99624 PKD1P6-201ENST00000343738 4769 ntBASIC20.14■□□□□ 0.81
SLC38A3Q99624 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC38A3Q99624 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SLC38A3Q99624 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC38A3Q99624 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC38A3Q99624 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC38A3Q99624 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC38A3Q99624 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC38A3Q99624 ECEL1P1-201ENST00000373592 1742 ntBASIC20.13■□□□□ 0.81
SLC38A3Q99624 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 LSM12P1-201ENST00000411836 588 ntBASIC20.13■□□□□ 0.81
SLC38A3Q99624 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.13■□□□□ 0.81
SLC38A3Q99624 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 AC097658.1-201ENST00000475555 843 ntBASIC20.13■□□□□ 0.81
SLC38A3Q99624 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.13■□□□□ 0.81
SLC38A3Q99624 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC38A3Q99624 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC38A3Q99624 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 RNA5SP413-201ENST00000516373 109 ntBASIC20.12■□□□□ 0.81
SLC38A3Q99624 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SLC38A3Q99624 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC38A3Q99624 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC38A3Q99624 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SLC38A3Q99624 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC38A3Q99624 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC38A3Q99624 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SLC38A3Q99624 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms