Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDCA3Q99618 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDCA3Q99618 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.83■■□□□ 1.09
CDCA3Q99618 C11orf96-202ENST00000528572 1834 ntBASIC21.83■■□□□ 1.09
CDCA3Q99618 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDCA3Q99618 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDCA3Q99618 AC133681.1-201ENST00000465482 601 ntBASIC21.83■■□□□ 1.09
CDCA3Q99618 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDCA3Q99618 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDCA3Q99618 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.83■■□□□ 1.09
CDCA3Q99618 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.83■■□□□ 1.09
CDCA3Q99618 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDCA3Q99618 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
CDCA3Q99618 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDCA3Q99618 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDCA3Q99618 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CDCA3Q99618 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA3Q99618 AL135905.2-201ENST00000584934 1404 ntBASIC21.82■■□□□ 1.08
CDCA3Q99618 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
CDCA3Q99618 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA3Q99618 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.82■■□□□ 1.08
CDCA3Q99618 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.82■■□□□ 1.08
CDCA3Q99618 MTDHP1-201ENST00000605323 784 ntBASIC21.82■■□□□ 1.08
CDCA3Q99618 AC010331.1-201ENST00000611423 582 ntBASIC21.82■■□□□ 1.08
CDCA3Q99618 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDCA3Q99618 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CDCA3Q99618 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA3Q99618 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA3Q99618 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA3Q99618 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDCA3Q99618 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDCA3Q99618 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA3Q99618 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.81■■□□□ 1.08
CDCA3Q99618 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 C2orf69P4-201ENST00000565394 541 ntBASIC21.81■■□□□ 1.08
CDCA3Q99618 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA3Q99618 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.81■■□□□ 1.08
CDCA3Q99618 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA3Q99618 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA3Q99618 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDCA3Q99618 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDCA3Q99618 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA3Q99618 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
CDCA3Q99618 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.8■■□□□ 1.08
CDCA3Q99618 AC093323.1-202ENST00000635031 2045 ntBASIC21.8■■□□□ 1.08
CDCA3Q99618 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA3Q99618 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDCA3Q99618 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA3Q99618 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCA3Q99618 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCA3Q99618 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCA3Q99618 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCA3Q99618 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDCA3Q99618 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCA3Q99618 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CDCA3Q99618 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDCA3Q99618 AC124016.1-201ENST00000609552 612 ntBASIC21.79■■□□□ 1.08
CDCA3Q99618 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA3Q99618 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCA3Q99618 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCA3Q99618 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.78■■□□□ 1.08
CDCA3Q99618 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CDCA3Q99618 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA3Q99618 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA3Q99618 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CDCA3Q99618 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA3Q99618 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA3Q99618 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms