Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.1■■■□□ 2.41
SCAF11Q99590 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF11Q99590 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC30.09■■■□□ 2.41
SCAF11Q99590 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
SCAF11Q99590 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF11Q99590 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
SCAF11Q99590 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC30.09■■■□□ 2.41
SCAF11Q99590 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC30.09■■■□□ 2.41
SCAF11Q99590 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF11Q99590 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
SCAF11Q99590 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.09■■■□□ 2.41
SCAF11Q99590 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF11Q99590 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF11Q99590 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.08■■■□□ 2.41
SCAF11Q99590 TSPY7P-201ENST00000431358 1114 ntBASIC30.08■■■□□ 2.41
SCAF11Q99590 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF11Q99590 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.08■■■□□ 2.41
SCAF11Q99590 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF11Q99590 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.08■■■□□ 2.41
SCAF11Q99590 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.08■■■□□ 2.41
SCAF11Q99590 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
SCAF11Q99590 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC30.08■■■□□ 2.41
SCAF11Q99590 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SCAF11Q99590 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF11Q99590 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF11Q99590 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF11Q99590 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
SCAF11Q99590 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF11Q99590 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF11Q99590 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.07■■■□□ 2.4
SCAF11Q99590 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.07■■■□□ 2.4
SCAF11Q99590 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF11Q99590 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC30.06■■■□□ 2.4
SCAF11Q99590 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF11Q99590 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SCAF11Q99590 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF11Q99590 MCRIP2P1-201ENST00000394346 511 ntBASIC30.06■■■□□ 2.4
SCAF11Q99590 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
SCAF11Q99590 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SCAF11Q99590 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF11Q99590 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
SCAF11Q99590 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.06■■■□□ 2.4
SCAF11Q99590 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF11Q99590 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
SCAF11Q99590 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
SCAF11Q99590 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF11Q99590 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
SCAF11Q99590 POM121L13P-201ENST00000422362 380 ntBASIC30.06■■■□□ 2.4
SCAF11Q99590 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SCAF11Q99590 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC30.06■■■□□ 2.4
SCAF11Q99590 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.05■■■□□ 2.4
SCAF11Q99590 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
SCAF11Q99590 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC30.05■■■□□ 2.4
SCAF11Q99590 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 RPS2P55-201ENST00000397318 883 ntBASIC30.05■■■□□ 2.4
SCAF11Q99590 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 AC107956.1-201ENST00000494359 873 ntBASIC30.05■■■□□ 2.4
SCAF11Q99590 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.05■■■□□ 2.4
SCAF11Q99590 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SCAF11Q99590 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.05■■■□□ 2.4
SCAF11Q99590 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC30.04■■■□□ 2.4
SCAF11Q99590 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
SCAF11Q99590 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC30.04■■■□□ 2.4
SCAF11Q99590 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
SCAF11Q99590 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SCAF11Q99590 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SCAF11Q99590 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.04■■■□□ 2.4
SCAF11Q99590 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.04■■■□□ 2.4
SCAF11Q99590 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SCAF11Q99590 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SCAF11Q99590 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SCAF11Q99590 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.03■■■□□ 2.4
SCAF11Q99590 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SCAF11Q99590 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SCAF11Q99590 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.03■■■□□ 2.4
SCAF11Q99590 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
SCAF11Q99590 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.03■■■□□ 2.4
SCAF11Q99590 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
SCAF11Q99590 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SCAF11Q99590 RCN1P1-201ENST00000400413 996 ntBASIC30.02■■■□□ 2.4
SCAF11Q99590 DHDH-203ENST00000522614 776 ntTSL 5 BASIC30.02■■■□□ 2.4
SCAF11Q99590 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
SCAF11Q99590 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SCAF11Q99590 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SCAF11Q99590 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.02■■■□□ 2.4
SCAF11Q99590 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SCAF11Q99590 AC087499.1-201ENST00000418141 1075 ntBASIC30.01■■■□□ 2.4
SCAF11Q99590 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms