Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BBS4Q96RK4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BBS4Q96RK4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BBS4Q96RK4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BBS4Q96RK4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BBS4Q96RK4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BBS4Q96RK4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
BBS4Q96RK4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BBS4Q96RK4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L2-201ENST00000561772 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L6-201ENST00000626483 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L1-201ENST00000627662 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L8-201ENST00000629013 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L3-201ENST00000630187 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L7-201ENST00000630678 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 DUX4L5-201ENST00000630834 1275 ntBASIC19.64■□□□□ 0.73
BBS4Q96RK4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BBS4Q96RK4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.64■□□□□ 0.73
BBS4Q96RK4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.63■□□□□ 0.73
BBS4Q96RK4 AC010141.2-201ENST00000452426 721 ntBASIC19.63■□□□□ 0.73
BBS4Q96RK4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BBS4Q96RK4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 AP001160.3-201ENST00000601484 763 ntBASIC19.62■□□□□ 0.73
BBS4Q96RK4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BBS4Q96RK4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
BBS4Q96RK4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.61■□□□□ 0.73
BBS4Q96RK4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BBS4Q96RK4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms