Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S3Q96PC3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S3Q96PC3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 AC021242.3-201ENST00000607598 1377 ntBASIC15.65■□□□□ 0.1
AP1S3Q96PC3 AC120498.9-201ENST00000339021 3867 ntBASIC15.65■□□□□ 0.1
AP1S3Q96PC3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 AC103834.1-201ENST00000520383 144 ntBASIC15.65■□□□□ 0.1
AP1S3Q96PC3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S3Q96PC3 AC009102.2-201ENST00000606772 1639 ntBASIC15.65■□□□□ 0.1
AP1S3Q96PC3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
AP1S3Q96PC3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 AC012354.3-201ENST00000623734 483 ntBASIC15.64■□□□□ 0.09
AP1S3Q96PC3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP1S3Q96PC3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 LINC01521-201ENST00000504184 1943 ntBASIC15.63■□□□□ 0.09
AP1S3Q96PC3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.63■□□□□ 0.09
AP1S3Q96PC3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.62■□□□□ 0.09
AP1S3Q96PC3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms