Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC123595.1-201ENST00000440769 1046 ntBASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 KRT18P5-201ENST00000436075 1291 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L2-201ENST00000561772 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 AC022517.1-201ENST00000592429 346 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 TPRG1LP1-201ENST00000598702 760 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L6-201ENST00000626483 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L1-201ENST00000627662 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L8-201ENST00000629013 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L3-201ENST00000630187 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L7-201ENST00000630678 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DUX4L5-201ENST00000630834 1275 ntBASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN4Q96NZ1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.58■□□□□ 0.57
FOXN4Q96NZ1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FOXN4Q96NZ1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN4Q96NZ1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.56■□□□□ 0.56
FOXN4Q96NZ1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms