Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 AC009102.2-201ENST00000606772 1639 ntBASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 AL512408.1-201ENST00000569378 2000 ntBASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 AC098818.2-201ENST00000564925 2320 ntBASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 AC003102.1-202ENST00000563394 1796 ntBASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 AL035685.1-201ENST00000636663 812 ntBASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP6Q96FZ7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMP6Q96FZ7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 AC099778.1-201ENST00000568593 1911 ntBASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP6Q96FZ7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHMP6Q96FZ7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 AC121338.2-201ENST00000622535 1744 ntBASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP6Q96FZ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CHMP6Q96FZ7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms