Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX1Q92499 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX1Q92499 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.17■■□□□ 1.14
DDX1Q92499 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX1Q92499 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX1Q92499 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX1Q92499 AP001160.3-201ENST00000601484 763 ntBASIC22.17■■□□□ 1.14
DDX1Q92499 AC104771.1-201ENST00000603335 964 ntBASIC22.17■■□□□ 1.14
DDX1Q92499 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX1Q92499 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
DDX1Q92499 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.17■■□□□ 1.14
DDX1Q92499 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX1Q92499 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX1Q92499 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX1Q92499 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX1Q92499 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX1Q92499 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX1Q92499 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX1Q92499 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX1Q92499 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX1Q92499 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX1Q92499 AC006128.1-201ENST00000624704 1661 ntBASIC22.15■■□□□ 1.14
DDX1Q92499 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX1Q92499 AC016769.1-201ENST00000409132 1010 ntBASIC22.15■■□□□ 1.14
DDX1Q92499 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.15■■□□□ 1.14
DDX1Q92499 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX1Q92499 SLC7A5P2-201ENST00000553010 536 ntBASIC22.15■■□□□ 1.14
DDX1Q92499 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX1Q92499 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX1Q92499 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX1Q92499 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX1Q92499 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX1Q92499 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX1Q92499 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DDX1Q92499 KRT16P2-201ENST00000414673 1423 ntBASIC22.14■■□□□ 1.14
DDX1Q92499 AC121338.2-201ENST00000622535 1744 ntBASIC22.14■■□□□ 1.14
DDX1Q92499 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX1Q92499 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.14■■□□□ 1.14
DDX1Q92499 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX1Q92499 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX1Q92499 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX1Q92499 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX1Q92499 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
DDX1Q92499 AC026185.1-201ENST00000445748 174 ntBASIC22.14■■□□□ 1.13
DDX1Q92499 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX1Q92499 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX1Q92499 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
DDX1Q92499 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.14■■□□□ 1.13
DDX1Q92499 RAP2CP1-201ENST00000605103 478 ntBASIC22.14■■□□□ 1.13
DDX1Q92499 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX1Q92499 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
DDX1Q92499 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX1Q92499 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
DDX1Q92499 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX1Q92499 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.13■■□□□ 1.13
DDX1Q92499 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
DDX1Q92499 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
DDX1Q92499 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 AC006015.1-201ENST00000429970 570 ntBASIC22.13■■□□□ 1.13
DDX1Q92499 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
DDX1Q92499 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
DDX1Q92499 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX1Q92499 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DDX1Q92499 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
DDX1Q92499 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.12■■□□□ 1.13
DDX1Q92499 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
DDX1Q92499 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
DDX1Q92499 AL355802.2-201ENST00000402069 882 ntBASIC22.12■■□□□ 1.13
DDX1Q92499 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX1Q92499 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX1Q92499 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms